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Flights from Manila to Tokyo

Cheapest airlines flights from Manila to Tokyo

You can choose from 14 airlines that fly from Manila to Tokyo, including Cebu Pacific, ZIPAIR, and Philippine Airlines. Philippines AirAsia has lowest fares on this route.
Cebu Pacific logo Cebu Pacific
ZIPAIR logo ZIPAIR
Philippine Airlines logo Philippine Airlines
Philippines AirAsia logo Philippines AirAsia
Jetstar Japan logo Jetstar Japan
All Nippon Airways logo All Nippon Airways
Japan Airlines logo Japan Airlines
Cathay Pacific logo Cathay Pacific
Greater Bay Airlines logo Greater Bay Airlines
HK Express logo HK Express
China Airlines logo China Airlines
Vietnam Airlines logo Vietnam Airlines
EVA Air logo EVA Air
STARLUX Airlines logo STARLUX Airlines
Airlines are determined based on actual purchased flight tickets from Manila to Tokyo according to previous 12 months data from Trip.com.

Search for direct flights from Manila to Tokyo in the next 3 months. Based on Trip.com's latest 7-day flight data, one-way direct flights start at US$94, and round-trip direct flights start at US$238.

      • Cheapest nonstop
        MNL 12:15
        4h 45m
        Nonstop
        NRT 18:00
        Manila - Tokyo | Wed, May 13 | Cebu Pacific
        NRT 19:40
        5h
        Nonstop
        MNL 23:40
        Tokyo - Manila | Fri, May 15 | Jetstar Japan
        US$238 US$290
        18% off
        18% off
        US$290 US$238
      • MNL 19:05
        4h 40m
        Nonstop
        HND 00:45
        Manila - Tokyo | Sat, May 2 | Philippine Airlines
        NRT 15:20
        9h 30m
        1 stop
        MNL 23:50
        Tokyo - Manila | Sat, May 9 | Philippine Airlines
        US$224 US$290
        23% off
        23% off
        US$290 US$224
      • MNL 04:40
        11h 5m
        1 stop
        NRT 16:45
        Manila - Tokyo | Fri, May 8 | Greater Bay Airlines
        NRT 19:40
        5h
        Nonstop
        MNL 23:40
        Tokyo - Manila | Mon, May 11 | Jetstar Japan
        US$234 US$290
        19% off
        19% off
        US$290 US$234
      • MNL 04:40
        9h 10m
        1 stop
        NRT 14:50
        Manila - Tokyo | Thu, May 14 | Greater Bay Airlines
        NRT 19:40
        5h
        Nonstop
        MNL 23:40
        Tokyo - Manila | Mon, May 18 | Jetstar Japan
        US$243
        16% off
        US$290 US$243
      • MNL 20:20
        24h 15m
        1 stop
        HND 21:35
        Manila - Tokyo | Mon, May 11 | Cathay Pacific
        NRT 22:00
        12h 35m
        1 stop
        MNL 09:35
        Tokyo - Manila | Wed, May 13 | Cathay Pacific
        US$244
        16% off
        US$290 US$244
      • MNL 05:30
        15h 5m
        1 stop
        HND 21:35
        Manila - Tokyo | Wed, May 13 | Cathay Pacific
        NRT 22:00
        27h 15m
        1 stop
        MNL 00:15
        Tokyo - Manila | Wed, May 20 | Cathay Pacific
        US$245
        16% off
        US$290 US$245
      • MNL 21:00
        15h 45m
        1 stop
        NRT 13:45
        Manila - Tokyo | Wed, May 13 | Xiamen Airlines
        NRT 19:40
        5h
        Nonstop
        MNL 23:40
        Tokyo - Manila | Fri, May 15 | Jetstar Japan
        US$248
        14% off
        US$290 US$248
      • MNL 12:30
        8h 5m
        1 stop
        HND 21:35
        Manila - Tokyo | Tue, May 12 | Cathay Pacific
        NRT 22:00
        14h 20m
        1 stop
        MNL 11:20
        Tokyo - Manila | Fri, May 15 | Cathay Pacific
        US$248
        14% off
        US$290 US$248
      • MNL 12:30
        8h 5m
        1 stop
        HND 21:35
        Manila - Tokyo | Thu, May 14 | Cathay Pacific
        NRT 18:30
        23h
        1 stop
        MNL 16:30
        Tokyo - Manila | Thu, May 21 | Cathay Pacific
        US$250
        14% off
        US$290 US$250
      • MNL 05:30
        11h 55m
        1 stop
        NRT 18:25
        Manila - Tokyo | Sat, May 2 | Cathay Pacific
        NRT 08:00
        9h 30m
        1 stop
        MNL 16:30
        Tokyo - Manila | Sat, May 9 | Cathay Pacific
        US$252
        13% off
        US$290 US$252
      • MNL 13:00
        17h 25m
        1 stop
        TYO Invalid Date
        Manila - Tokyo | Tue, Mar 17 | Normal Airline
        TYO 15:00
        6h
        Nonstop
        MNL 16:00
        Tokyo - Manila | Thu, Mar 19 | Normal Airline
        Find more flights
        Find more flights
      • Cheapest nonstop
        MNL 04:35
        4h 35m
        Nonstop
        NRT 10:10
        Manila - Tokyo | Mon, May 11 | Philippines AirAsia
        US$94 US$160
        41% off
        41% off
        US$160 US$94
      • MNL 12:30
        4h 40m
        Nonstop
        NRT 18:10
        Manila - Tokyo | Mon, May 11 | Cebu Pacific
        US$98 US$160
        39% off
        39% off
        US$160 US$98
      • MNL 04:35
        4h 35m
        Nonstop
        NRT 10:10
        Manila - Tokyo | Wed, May 13 | Philippines AirAsia
        US$106 US$160
        34% off
        34% off
        US$160 US$106
      • MNL 04:35
        4h 35m
        Nonstop
        NRT 10:10
        Manila - Tokyo | Thu, Apr 9 | Philippines AirAsia
        US$124
        23% off
        US$160 US$124
      • MNL 00:40
        4h 30m
        Nonstop
        NRT 06:10
        Manila - Tokyo | Sat, May 9 | Jetstar Japan
        US$137
        14% off
        US$160 US$137
      • MNL 00:40
        4h 30m
        Nonstop
        NRT 06:10
        Manila - Tokyo | Tue, May 12 | Jetstar Japan
        US$137
        14% off
        US$160 US$137
      • MNL 19:25
        14h 15m
        1 stop
        NRT 10:40
        Manila - Tokyo | Wed, May 13 | Cebu Pacific
        US$107
        33% off
        US$160 US$107
      • MNL 04:40
        9h 10m
        1 stop
        NRT 14:50
        Manila - Tokyo | Tue, May 12 | Greater Bay Airlines
        US$108
        33% off
        US$160 US$108
      • MNL 02:50
        18h 35m
        1 stop
        NRT 22:25
        Manila - Tokyo | Wed, May 13 | Jetstar Japan
        US$138
        14% off
        US$160 US$138
      • MNL 02:50
        18h 35m
        1 stop
        NRT 22:25
        Manila - Tokyo | Tue, Apr 7 | Jetstar Japan
        US$139
        13% off
        US$160 US$139
      • MNL 13:00
        17h 25m
        1 stop
        TYO Invalid Date
        Manila - Tokyo | Tue, Mar 17 | Normal Airline
        Find more flights
        Find more flights

Displayed flight fares from Manila to Tokyo are based on average prices across airlines for the next 3 months, according to the latest Trip.com database.

Manila to Tokyo Flight Details

The distance between Manila and Tokyo is about 3,006.45 km. The average flying time from Manila to Tokyo is around 4 hours 19 minutes. Based on Trip.com's latest data, travel demand is highest in July. The off-season for travel is January.

Cheapest one-way flight priceUS$94
Cheapest return ticket priceUS$224
Cheapest monthJanuary
Peak season for travelJuly
Flight distance3,006.45 km
Average flight time4 hours 19 minutes
Popular airlineCebu Pacific
Flight statistics for the Manila–Tokyo route are based on aggregated booking data from Trip.com over the past 12 months.

Trip.com Price Insights on Flights from Manila to Tokyo

Which month has the cheapest one-way flights from Manila to Tokyo?

The average price of one-way flights from Manila to Tokyo purchased by Trip.com users by month over the past 12 months.

Based on Trip.com’s data, the cheapest month for flights from Manila to Tokyo is July, with an average price of US$56; while the month with the highest flight price is usually March, with an average price of up to US$82.

US$82
US$69
US$56
US$43
    Cheapest
  • US$82
    Mar
  • US$73
    Apr
  • US$69
    May
  • US$62
    Jun
  • US$56
    Jul
  • US$57
    Aug
  • US$56
    Sep
  • US$63
    Oct
  • US$69
    Nov
  • US$67
    Dec
  • US$58
    Jan
  • US$75
    Feb

Which month has the cheapest round-trip flights from Manila to Tokyo?

The average price of round-trip flights from Manila to Tokyo purchased by Trip.com users by month over the past 12 months.

Based on data from Trip.com, the lowest prices for round-trip flights from Manila to Tokyo are found during October, with an average price of US$215. Conversely, the highest prices are found during March, with an average price of up to US$439.

US$439
US$327
US$215
US$103
    Cheapest
  • US$439
    Mar
  • US$356
    Apr
  • US$291
    May
  • US$284
    Jun
  • US$284
    Jul
  • US$296
    Aug
  • US$225
    Sep
  • US$215
    Oct
  • US$233
    Nov
  • US$258
    Dec
  • US$310
    Jan
  • US$252
    Feb

What is the cheapest day of the week to fly from Manila to Tokyo?

Average weekly flight prices from Manila to Tokyo by travel date (Based on Trip.com’s past 12 months of data)

Based on Trip.com’s past 12 months of flight data, the cheapest day to fly from Manila to Tokyo is Friday, with average prices lower than on other days. Avoid Saturday, as prices are usually highest then.

US$178
US$170
US$161
US$153
    Cheapest
  • US$168
    Mon
  • US$174
    Tue
  • US$167
    Wed
  • US$176
    Thu
  • US$161
    Fri
  • US$178
    Sat
  • US$167
    Sun

What is the cheapest day to fly from Manila to Tokyo during Easter Day?

Based on Trip.com's data over the past 3 days, these are the lowest one-way flight prices from Manila to Tokyo during Easter Day.

During the Easter Day period, the cheapest flights from Manila to Tokyo were available on Apr 12 with the lowest price being US$124.

US$290
US$207
US$124
US$41
    Cheapest
  • US$290
    Apr 8
  • US$212
    Apr 9
  • US$205
    Apr 10
  • US$212
    Apr 11
  • US$124
    Apr 12
  • US$229
    Apr 13
  • US$159
    Apr 14

Frequently Asked Questions

  • What are the cheapest flights from Manila to Tokyo (MNL-TYO)?

    Based on Trip.com data, Philippines AirAsia offers one-way fares as low as US$94 on Cheapest nonstop routes (e.g. MNL to NRT on Mon, May 11), while Philippine Airlines offers Cheapest nonstop round-trips from US$224 departing on Sat, May 2 and returning on Sat, May 9.
  • At the moment, you can catch a nonstop flight from Manila to Tokyo with the following airlines, including: Cebu Pacific ZIPAIR Philippine Airlines Philippines AirAsia Jetstar Japan Selected airlines are based on historical data collected from flight bookings users made on Trip.com within the last 90 days.
  • It takes about 4 hours 19 minutes to fly from Manila to Tokyo.
  • By analyzing data from all airlines on the Trip.com flight calendar, it looks like the best time to book a flight from Manila to Tokyo is around 40 days (6 weeks) in advance, and the best time to fly is usually on Tuesday, Wednesday, and Saturday. Tuesday typically offers the cheapest flights for departure, while Saturday offers the best return deals.
  • Based on Trip.com data in the past 4 weeks, there is 61 flight per week flying from Manila to Tokyo. You can check the weekly schedule for popular airlines on this route below: Philippine Airlines: S/M/T/W/T/F/S -- PR428 (07:41) Philippines AirAsia: S/M/T/W/T/F/S -- Z2190 (04:42) All Nippon Airways: S/M/T/W/T/F/S -- NH5338 (07:41)
  • To find best deals on flights from Manila to Tokyo, you can use various tools on Trip.com:
    · Be flexible with your travel dates to get the cheapest flight deal. Now the cheapest flight deal is on Mon, May 11, with one-way flights priced at just US$94.
    · Compare airlines strategically. Budget carriers often provide the lowest base fares, while we found the most affordable airline currently operating on this route is Philippines AirAsia.
    · Set up price alerts to easily monitor ticket prices without having to check every day.
    · Check Trip.com flight deals and promo codes frequently.
    · Avoid peak season unless you book very early. It seems the peak season for Tokyo travel is around July.
    · Get exclusive promo codes for Trip.com app users.
  • The cheapest months to fly from Manila to Tokyo is January, when demand for travel is lower.
  • After crunching the numbers on our March flight calendar, it's currently cheapest to fly from Manila to Tokyo on March 16, 2026 with Philippines AirAsia, with prices starting at US$88.
  • You can land at any one of the following hubs in Tokyo, with Ninoy Aquino International Airport to Narita International Airport (MNL-NRT) is by far the most common option on this route: Haneda Airport (HND) Narita International Airport (NRT).
  • The time difference between Tokyo and Manila is 1h.
  • Tickets can only be changed or canceled if permitted by airline policy. To submit a change or cancellation request, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and segment, and submit a request. Please note that additional charges may apply according to the airline ticket policy. However, if the flight has been rescheduled and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For more details about change and cancellation policies, please check the customer support pages.

Flights from Manila to Tokyo

For generations, Tokyo has been everyone’s favorite travel destination. This is mainly because the capital city of Japan is known for its cultural and traditional values. Whether it is fashion, technology or science – Tokyo has always kept the world amazed. And, this is why you are bound to see thousands of travelers going from Manila to Tokyo. The city is loaded with so many things to do. And, if you are looking for cheap flights to Tokyo, you must start the quest as early as possible.

Tip: If you are a tech lover, you must visit Akihabara in Tokyo as soon as your flight reaches the destination! This is a place that is loaded with shops. You will find everything from the latest devices to toy models in this area.

Flying to Tokyo from Manila

First things first, there are 80 direct flights to Tokyo from Manila. Your travel from Manila to Tokyo will begin at the Manila Ninoy Aquino International Airport. And, your destination will be the Narita International Airport in Tokyo. Most of the time, you will find flights in the morning from Manila to Tokyo. On average, your trip to Tokyo will be around 5 hours. All year round, there are direct flights to Tokyo. Four common Airlines connecting these two cities would be All Nippon Airways, Philippines Air Asia, Cebu Pacific Air and Malaysia Airlines. Of these, the cheap flights from Manila to Tokyo are offered by Cebu Pacific Air. 

Tip: There are two international airports in Tokyo: Narita Airport and Haneda Airport. To experience the best of the city, from day one, you should pick a flight to Narita Airport.

Why Visit Tokyo?

When you are in Tokyo, you will be drawn to the Kabuki Theatre. This is a place where you will be able to see the city’s historical elements. It is a must to visit the Kabuki show during your stay. Your visit to any Japanese city will be incomplete without the Cherry Blossom or Sakura trees. This is one of the world’s most picturesque scenes. Yet, when you want to experience the Cherry Blossoms, you must book Manila to Tokyo flights during spring. And, the trip has to be pre-planned! This is because the Cherry Blossoms last for less than a week. Finally, do spend some time visiting the temples and shrines in Tokyo. These are hallmark destinations in Japan.

Tip: Kabuki is an interesting, cultural drama practiced in Japan. It involves brightly painted actors and plenty of masks.

Where to stay in Tokyo?

Anyone visiting Tokyo will be advised to book their stay in Ginza or Shinjuku. These places are loaded with a youthful vibe and are well-connected with the rest of the city. Of course, if you are aiming for endless parties at night, you should choose Shibuya for accommodation. And, if you want to see and experience the bullet train rides of Tokyo, choose Ginza. Asakusa is recommended as a destination for people who want to dwell on Japan’s cultural vibes. Also, Asakusa is budget friendly.

To help you with Manila – Tokyo flight booking, and affordable accommodation suggestions, choose Trip.com. We will ensure that you have a pleasant, and a well-planned trip to Tokyo all year round.

Trip.com Airline Insights on Flights from Manila to Tokyo

Which airline offers the cheapest direct flights from Manila to Tokyo?

Data is based on the average price of all nonstop flights from Manila to Tokyo on Trip.com over the past 12 months.

Based on Trip.com’s data from the past 12 months, Jetstar Japan provides the lowest-priced direct flights from Manila to Tokyo, with fares starting at US$138.

US$5
US$138
US$272
US$406
US$539
Jetstar Japan
US$138
Jetstar Japan
Philippines AirAsia
US$145
Philippines AirAsia
Cebu Pacific
US$163
Cebu Pacific
ZIPAIR
US$176
ZIPAIR
Philippine Airlines
US$304
Philippine Airlines
All Nippon Airways
US$539
All Nippon Airways

Which airline operates the most flights from Manila to Tokyo?

Total flights from Manila to Tokyo across all airlines. (Based on Trip.com data from the past month)

Based on Trip.com’s data from the past month, Philippine Airlines operates the most frequent flights from Manila to Tokyo, with 46 flights per week.

0
12
29
46
Philippine Airlines
46
Philippine Airlines
All Nippon Airways
45
All Nippon Airways
American Airlines
30
American Airlines
Cebu Pacific
16
Cebu Pacific
Japan Airlines
16
Japan Airlines
Philippines AirAsia
12
Philippines AirAsia

How many flights fly from Manila to Tokyo daily?

The data is based on the flight numbers for each day of the week from Manila to Tokyo within the Trip.com database over the past month.

Based on the past month's historical data from Trip.com, the number of flights from Manila to Tokyo is the highest on Friday and the lowest on Thursday.

125
108
90
73
Highest
93
Mon
93
Tue
97
Wed
90
Thu
125
Fri
118
Sat
116
Sun

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Note: Prices shown on this page are the estimated lowest prices found in the last 24 hours and include all taxes and fees.

Book with no extra fees

Prices displayed on this page are all-inclusive (incl. taxes, fuel surcharges, Civil Aviation Development Fund, etc.), and all fees are clearly shown before you pay. Charges for checked baggage, onboard meals, Wi‑Fi, and other optional services are also included where applicable in the flight cards.

Real-time pricing updates

Prices, availability, and travel details on this page have been updated within the last 24 hours, and for many routes are refreshed in real time. The more popular the route, the more accurate and up-to-date the data.

Change & Cancellation Policy

Trip.com shows the change and cancellation rules for each ticket during the booking process, including all related fees and conditions. Please refer to the following scenarios:
Voluntary cancellation/change:
To request a change or cancellation, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and flight segment, and submit your request. Please note that additional charges may apply based on the airline’s fare rules.
Cancellation/change due to a flight schedule change:
If your flight has been rescheduled and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For full details of change and cancellation policies, please refer to the customer support pages.