Flight Time from Manila to Tokyo

At the moment, you can catch a nonstop flight from Manila to Tokyo with the following airlines, including: Philippine Airlines ZIPAIR Philippines AirAsia Cebu Pacific Jetstar Japan Selected airlines are based on historical data collected from flight bookings users made on Trip.com within the last 90 days.

It takes around 4 hours 19 minutes to fly from Manila (MNL) to Tokyo (TYO).

By analyzing data from all airlines on the Trip.com flight calendar, it looks like the best time to book a flight from Manila to Tokyo is around 40 days (6 weeks) in advance, and the best time to fly is usually on Tuesday, Wednesday, and Saturday. Tuesday typically offers the cheapest flights for departure, while Saturday offers the best return deals.

Based on Trip.com data in the past 4 weeks, there is 60 flight per week flying from Manila to Tokyo. You can check the weekly schedule for popular airlines on this route below: Philippine Airlines: S/M/T/W/T/F/S -- PR3102 (09:53)

The cheapest months to fly from Manila to Tokyo is January, when demand for travel is lower.

After crunching the numbers on our December flight calendar, it's currently cheapest to fly from Manila to Tokyo on December 9, 2025 with Cebu Pacific, with prices starting at PHP 3,893.

You can land at any one of the following hubs in Tokyo, with Ninoy Aquino International Airport to Narita International Airport (MNL-NRT) is by far the most common option on this route: Narita International Airport (NRT) Haneda Airport (HND).

The time difference between Tokyo and Manila is 1h.

Tickets can only be changed or canceled if permitted by airline policy. To submit a change or cancellation request, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and segment, and submit a request. Please note that additional charges may apply according to the airline ticket policy. However, if the flight has been rescheduled and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For more details about change and cancellation policies, please check the customer support pages.